The detailed information of tRNA gene sequence


Sequence ID>WENV170725669
Genome IDLSQX01351950
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 25249
End posion on genome 25174
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tgcctagttt
tRNA gene sequence 
GGTCTGTTGGCTCAGTTGGTAGAGCACATCGTTCACATCGATGGGGTCACTGGTTCGAGT
CCAGTACAGACCACCA
Downstream region at tRNA end position 
aaaccgctat
Secondary structure (Cloverleaf model)
>WENV170725669	Val	CAC
                   t      ACCA aaaccgctat
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C
                     T - A          T G
                    T     T G A C C     A
      T G A        G      | | | | |     G
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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