The detailed information of tRNA gene sequence


Sequence ID>WENV170725689
Genome IDLSQX01352387
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1858
End posion on genome 1784
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ttgtaataga
tRNA gene sequence 
GGGCCCGTAGCCTAGCTGGATAGGGCGTCGGACTTCTAATCCGAAGACCCCGGGTTCAAA
TCCCGGCGGGTCCGCtc
Downstream region at tRNA end position 
tctttattct
Secondary structure (Cloverleaf model)
>WENV170725689	Arg	TCT
                   a      GCtc tctttattct
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    T       T C C G       C C G G G     C
    G       + | | |                 T T
    G       G G G C
      A T A        G     AGACC
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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