The detailed information of tRNA gene sequence


Sequence ID>WENV170725721
Genome IDLSQX01353298
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 5189
End posion on genome 5264
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
ttagagcttt
tRNA gene sequence 
CCGGGTGTGGCGCAGTTGGTAGCGCGCTTGACTGGGGGTCAAGAGGCCGTGAGTTCAAGT
CTCGCCACTCGGACCA
Downstream region at tRNA end position 
gaatgtatct
Secondary structure (Cloverleaf model)
>WENV170725721	Pro	GGG
                   t      ACCA gaatgtatct
                     C - G
                     C - G
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     C G C T C     A
      T G A        G      | + | | |     A
    T       C G C G       G T G A G     C
    G       | | | |                 T T
    G       G C G C
      T A          G     AGGCC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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