The detailed information of tRNA gene sequence


Sequence ID>WENV170725841
Genome IDLSQX01358866
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 38000
End posion on genome 38076
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
agtaaaatat
tRNA gene sequence 
GGTGGCGTAGTTCAGTTGGTTAGAATGCCGGCCTGTCACGCCGGAGGTCGCGAGTTCGAG
TCTCGTCGTCACCGCAA
Downstream region at tRNA end position 
agaaaagcag
Secondary structure (Cloverleaf model)
>WENV170725841	Asp	GTC
                   t      GCAA agaaaagcag
                     G - C
                     G - C
                     T - A
                     G - C
                     G + T
                     C - G
                     G - C          T G
                    T     T G C T C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G A G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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