The detailed information of tRNA gene sequence


Sequence ID>WENV170725969
Genome IDLSQX01362646
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 4553
End posion on genome 4464
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
agccgccatt
tRNA gene sequence 
GGAAGCGTGGCAGAGCGGTTTAATGCACCGGTCTTGAAAACCGACGAGGGTGTGAGTCCT
CCGTGAGTTCGAATCTCACCGCTTCCGCCA
Downstream region at tRNA end position 
aattttatct
Secondary structure (Cloverleaf model)
>WENV170725969	Ser	TGA
                   t      GCCA aattttatct
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C A C T C     A
      C G A        G      | | | | |     G
    G       G A C G       G T G A G     C
    G         | | |                 T T
    T       A T G C
      T T A        A     CGAGGGTGTGAGTCCTCC
                    C   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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