The detailed information of tRNA gene sequence


Sequence ID>WENV170726039
Genome IDLSQX01365591
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 7214
End posion on genome 7289
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
tccataaaat
tRNA gene sequence 
GGGGGCGTAGCTCAGCTGGGAGAGCGTACGGTTCGCATCCGTAAGGTCGAGAGTTCGATC
CTCTTCGTCTCCACCA
Downstream region at tRNA end position 
agaaagccag
Secondary structure (Cloverleaf model)
>WENV170726039	Ala	CGC
                   t      ACCA agaaagccag
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     C - G
                     G - C          C T
                    T     T T C T C     A
      C G A        A      + | | | |     G
    T       C T C G       G A G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    T - A
                    A - T
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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