The detailed information of tRNA gene sequence


Sequence ID>WENV170726150
Genome IDLSQX01369038
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 20764
End posion on genome 20854
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
caccaggact
tRNA gene sequence 
GGAAGCTTGGCAGAGCGGTTGAATGCACCGGTCTTGAAAACCGGCGAGGGTTAATAGCCC
TCCGTGAGTTCGAATCTCACAGCTTCCGCCA
Downstream region at tRNA end position 
gatatttaaa
Secondary structure (Cloverleaf model)
>WENV170726150	Ser	TGA
                   t      GCCA gatatttaaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     T - A          T A
                    T     C A C T C     A
      C G A        G      | | | | |     G
    G       G A C G       G T G A G     C
    G         | | |                 T T
    T       A T G C
      T G A        A     CGAGGGTTAATAGCCCTCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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