The detailed information of tRNA gene sequence


Sequence ID>WENV170726214
Genome IDLSQX01371216
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 45753
End posion on genome 45677
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gctgcgttgc
tRNA gene sequence 
GGGGGCGTAGCTCAATTGGTTAGAGCGCTGCCCTGTCACGGCAGAGGTTGCGGGTTCGAG
TCCCGTCGCTCCCGCCA
Downstream region at tRNA end position 
ctctggttca
Secondary structure (Cloverleaf model)
>WENV170726214	Asp	GTC
                   c      GCCA ctctggttca
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C          T G
                    T     T G C C C     A
      T A A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTT
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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