The detailed information of tRNA gene sequence


Sequence ID>WENV170726282
Genome IDLSQX01373848
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 3540
End posion on genome 3467
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
agaccctgtg
tRNA gene sequence 
GCCGGGGTAGGGTAGAGGTCCATCCTGTGGCCCTGTGGAGGCTACGACCCGAGTTCGATT
CTCGGTCCCGGCCCtt
Downstream region at tRNA end position 
aactattttt
Secondary structure (Cloverleaf model)
>WENV170726282	His	GTG
                   g      CCtt aactattttt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T T
                    T     G G C T C     A
      A G A        A      | | | | |     G
    G       T G G G       C C G A G     C
    G         | | +                 T T
    T       T C C T
      C C A        G     CGAC
                    T - A
                    G + T
                    G - C
                    C - G
                    C - G
                  C       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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