The detailed information of tRNA gene sequence


Sequence ID>WENV170726298
Genome IDLSQX01374745
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 58669
End posion on genome 58595
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gccgccannc
tRNA gene sequence 
CGGGGTGTAGCGCAGACGGCTAGCGCGCCGCGTTTGGGACGCGGAGGTCGGCGGTTCAAG
TCCGCCCACCCCGACtg
Downstream region at tRNA end position 
ttgataaatg
Secondary structure (Cloverleaf model)
>WENV170726298	Pro	TGG
                   c      ACtg ttgataaatg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C C G C C     A
      A G A        A      | | | | |     A
    C       C G C G       G G C G G     C
    G       | | | |                 T T
    G       G C G C
      C T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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