The detailed information of tRNA gene sequence


Sequence ID>WENV170726344
Genome IDLSQX01376300
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 888
End posion on genome 961
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tactttgtta
tRNA gene sequence 
GGGCTGGTAGCTCAGGTTGGTAGAGCGTCGCCTTGGCATGGCGGAGGCCCCGGGTTCAAA
TCCCGGCCAGTCCAttc
Downstream region at tRNA end position 
catttctagt
Secondary structure (Cloverleaf model)
>WENV170726344	Ala	GGC
                   a      Attc catttctagt
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     G - C
                     G - C          T A
                    T     G G C C C     A
      G G A        A      | | | | |     A
    T       C T C G       C C G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     AGGCC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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