The detailed information of tRNA gene sequence


Sequence ID>WENV170726365
Genome IDLSQX01377202
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1433
End posion on genome 1506
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
caaaacagac
tRNA gene sequence 
ACGGGTGTAGCTCAGTTGGCAGAGCACTGGTCTCCAAAACCAGGTGTCGGGAGTTCGAGT
CTCTCCTCCCGTGCag
Downstream region at tRNA end position 
agaaaagaca
Secondary structure (Cloverleaf model)
>WENV170726365	Trp	CCA
                   c      GCag agaaaagaca
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     T   T
                     G - C          T G
                    T     C T C T C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GTGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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