The detailed information of tRNA gene sequence


Sequence ID>WENV170726387
Genome IDLSQX01378261
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1106
End posion on genome 1030
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gccagcagtt
tRNA gene sequence 
GGGTCAGTAGCTCAGTCGGTTAGAGCACCGTCTTGATAAGGCGGGGGTCGCTGGTTCGAT
TCCAGCTTGACCCACCA
Downstream region at tRNA end position 
aacaggtttg
Secondary structure (Cloverleaf model)
>WENV170726387	Ile	GAT
                   t      ACCA aacaggtttg
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     A - T
                     G + T          T T
                    T     C G A C C     A
      T G A        A      | | | | |     G
    C       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    T + G
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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