The detailed information of tRNA gene sequence


Sequence ID>WENV170726523
Genome IDLSQX01384136
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 2234
End posion on genome 2307
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
atgagactcT
tRNA gene sequence 
GGACTTGTAGGGTAGTGGATATCCTTTCGGGCTTCGAACCCGAAGAACCGGGTTCGATCC
CCGGCAGGTCCGTtc
Downstream region at tRNA end position 
cgttcataga
Secondary structure (Cloverleaf model)
>WENV170726523	Arg	TCG
                   T      GTtc cgttcataga
                     G - C
                     G - C
                     A - T
                     C - G
                     T + G
                     T - A
                     G - C          C T
                    T     G G C C C     A
      T G A        A      | | | | |     G
    G       T G G G       C C G G G     C
    G         | | +                 T T
    A       T C C T
      T A          T     AGAA
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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