The detailed information of tRNA gene sequence


Sequence ID>WENV170726570
Genome IDLSQX01386166
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 500
End posion on genome 576
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gttagggata
tRNA gene sequence 
GGGTCAGTAGCTCAGTTGGTTAGAGCACCGTCTTGATAAGGCGGGGGTCGCTGGTTCGAT
TCCAGCTTGACCCACCA
Downstream region at tRNA end position 
ccgcgttggc
Secondary structure (Cloverleaf model)
>WENV170726570	Ile	GAT
                   a      ACCA ccgcgttggc
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     A - T
                     G + T          T T
                    T     C G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    T + G
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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