The detailed information of tRNA gene sequence


Sequence ID>WENV170726656
Genome IDLSQX01388848
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 4202
End posion on genome 4274
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ctttttgtat
tRNA gene sequence 
GGATTCGTGGTCTAGTGGTATGACGTCGCCTTCACACGGCGAAGGTCAGGAGTTCGAATC
TCCTCGGATCCACtg
Downstream region at tRNA end position 
ttttcttttt
Secondary structure (Cloverleaf model)
>WENV170726656	Val	CAC
                   t      ACtg ttttcttttt
                     G - C
                     G - C
                     A - T
                     T - A
                     T + G
                     C - G
                     G - C          T A
                    T     T C C T C     A
        G A        G      | | | | |     G
      T     T C T G       A G G A G     C
      G       | | |                 T T
      G     T G A C
        T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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