The detailed information of tRNA gene sequence


Sequence ID>WENV170726659
Genome IDLSQX01389012
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1813
End posion on genome 1737
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
agtattaaat
tRNA gene sequence 
GCTTCCATAGCTCAGCTGGATAGAGCAACGCCCTTCTAAGGCGTAGGCCGTACGTTCGAA
TCGTACTGGGAGTACCA
Downstream region at tRNA end position 
ttttggttta
Secondary structure (Cloverleaf model)
>WENV170726659	Arg	TCT
                   t      ACCA ttttggttta
                     G + T
                     C - G
                     T - A
                     T + G
                     C - G
                     C - G
                     A - T          T A
                    T     C A T G C     A
      C G A        A      | | | | |     G
    T       C T C G       G T A C G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGCC
                    A - T
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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