The detailed information of tRNA gene sequence


Sequence ID>WENV170726690
Genome IDLSQX01390186
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1158
End posion on genome 1234
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
caaaccagcc
tRNA gene sequence 
AGTCCTATAGCTCAGTTGGTTAGAGCGCTACACTGATAATGTAGAGGTCGGCAGTTCAAC
TCTGCCTGGGACTACAA
Downstream region at tRNA end position 
gggccgcagc
Secondary structure (Cloverleaf model)
>WENV170726690	Ile	GAT
                   c      ACAA gggccgcagc
                     A - T
                     G - C
                     T - A
                     C - G
                     C - G
                     T + G
                     A - T          T C
                    T     C C G T C     A
      T G A        A      | | | | |     A
    T       C T C G       G G C A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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