The detailed information of tRNA gene sequence


Sequence ID>WENV170726701
Genome IDLSQX01390615
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 12602
End posion on genome 12688
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
caggtgctca
tRNA gene sequence 
GGAGGATTCGACTAGCGGCCTATGTCACACGCCTGGAACGCGTGCGGGTAGCAATACCCT
CGTGGGTTCAAATCCCACATCCTCCGCag
Downstream region at tRNA end position 
tctgatgccg
Secondary structure (Cloverleaf model)
>WENV170726701	Ser	GGA
                   a      GCag tctgatgccg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     C A C C C     A
      C G A        C      | | | | |     A
    G       T C A G       G T G G G     C
    G         | | |                 T T
    C       T G T C
      C T A        A     CGGGTAGCAATACCCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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