The detailed information of tRNA gene sequence


Sequence ID>WENV170726730
Genome IDLSQX01392091
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 18859
End posion on genome 18786
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
aaaagcacac
tRNA gene sequence 
GGCCCCATCGTATAGCGGCCTAGTACGCCGCCCTCTCACGGCGGTAACGCGGGTTCGAAT
CCCGCTGGGGTCACag
Downstream region at tRNA end position 
tgagaaaccc
Secondary structure (Cloverleaf model)
>WENV170726730	Glu	CTC
                   c      ACag tgagaaaccc
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     C G C C C     A
      C G A        C      | | | | |     G
    G       T A T G       G C G G G     C
    G       + | | |                 T T
    C       G T A C
      C T A        G     TAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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