The detailed information of tRNA gene sequence


Sequence ID>WENV170726764
Genome IDLSQX01393742
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 938
End posion on genome 1012
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
atgcggtttT
tRNA gene sequence 
AGGTCAGTAGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGCGGGTTCGAAT
CCCTCCTGGCCTGTtg
Downstream region at tRNA end position 
atgcgatgtg
Secondary structure (Cloverleaf model)
>WENV170726764	Trp	CCA
                   T      GTtg atgcgatgtg
                     A - T
                     G - C
                     G - C
                     T + G
                     C - G
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T A A        A      |   | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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