The detailed information of tRNA gene sequence


Sequence ID>WENV170726787
Genome IDLSQX01394270
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1460
End posion on genome 1385
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aggttcttat
tRNA gene sequence 
ACGGGGCTAGCTCTGTTGGTAGAGCACTGGTCTCCAAAACCAGGTGTCGGGAGTTCGAGT
CTCTCGACCCGTGCGA
Downstream region at tRNA end position 
aacgaaccga
Secondary structure (Cloverleaf model)
>WENV170726787	Trp	CCA
                   t      GCGA aacgaaccga
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     G   A
                     C - G          T G
                    T     C T C T C     A
      T G T        A      | + | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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