The detailed information of tRNA gene sequence


Sequence ID>WENV170726788
Genome IDLSQX01394284
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 5044
End posion on genome 5121
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ggtacaaaca
tRNA gene sequence 
GGGGCAGTAGGGTAGCCTGGTCCATCCTAGAGCGTTTGGGACGCTTTGACGGCAGTTCGA
ATCTGCCCTGCCCCATCA
Downstream region at tRNA end position 
gatatgaacc
Secondary structure (Cloverleaf model)
>WENV170726788	Pro	TGG
                   a      ATCA gatatgaacc
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C          T A
                    T     C C G T C     A
    C C G A        A      | | | | |     G
  T         T G G G       G G C A G     C
  G           | | +                 T T
  G         T C C T
    T C C A        A     TGAC
                    G + T
                    A - T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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