The detailed information of tRNA gene sequence


Sequence ID>WENV170726855
Genome IDLSQX01396308
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 10066
End posion on genome 9990
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
gggcagacac
tRNA gene sequence 
GGGCTCGTGGTCTAGCTGGTTATGACGTCGCCTTGACATGGCGGAGGTCCTGAGTTCGAA
TCTCAGCGAGCCCATCA
Downstream region at tRNA end position 
ccgtttttga
Secondary structure (Cloverleaf model)
>WENV170726855	Val	GAC
                   c      ATCA ccgtttttga
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     G A C T C     A
      C G A        G      | | | | |     G
    T       T C T G       C T G A G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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