The detailed information of tRNA gene sequence


Sequence ID>WENV170727022
Genome IDLSQX01401830
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 30169
End posion on genome 30092
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position
acggacagtt
tRNA gene sequence
CGGGATGTAGCTCAGTTTGGCTAGAGCGCACGGTTCGGGACCGTGAGGTCGCTGGTTCAA
ATCCAGTCATCCCGACCA
Downstream region at tRNA end position
aatcacccaa
Secondary structure (Cloverleaf model)
>WENV170727022	Pro	CGG
                   t      ACCA aatcacccaa
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T G A C C     A
    T T G A        A      + | | | |     A
  T         C T C G       G C T G G     C
  G         | | | |                 T T
  G         G A G C
    C T A          G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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