The detailed information of tRNA gene sequence


Sequence ID>WENV170727105
Genome IDLSQX01404956
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 608
End posion on genome 534
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gaacgtcctt
tRNA gene sequence 
GGGCGGTTAACTCAGCGGGAGAGTGCTACCTTCACACGGTAGAAGTCACTGGTTCAATCC
CAGTACCGCCTACCA
Downstream region at tRNA end position 
taaacaaatc
Secondary structure (Cloverleaf model)
>WENV170727105	Val	CAC
                   t      ACCA taaacaaatc
                     G + T
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          C T
                    T     T G A C C     A
        G A        A      | | | | |     A
      C     C T C A       A C T G G     C
      G     | | | |                 T T
      G     G A G T
        G A        G     AAGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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