The detailed information of tRNA gene sequence


Sequence ID>WENV170727127
Genome IDLSQX01405805
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 2146
End posion on genome 2231
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gaaattctat
tRNA gene sequence 
GTTGAGGTAGCCAAGCCTGGTATGGCGCAGGTTTGCTAAACCTGTGTCCCTCTGGGACTC
GAGGGTTCAAATCCCTCCCTCAACGCtt
Downstream region at tRNA end position 
tcaccgacaa
Secondary structure (Cloverleaf model)
>WENV170727127	Ser	GCT
                   t      GCtt tcaccgacaa
                     G - C
                     T - A
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | | | | |     A
    C       A C C G       G A G G G     C
    T       | | | |                 T T
    G       T G G C
      G T A        G     TGTCCCTCTGGGACTC
                    C - G
                    A - T
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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