The detailed information of tRNA gene sequence


Sequence ID>WENV170727239
Genome IDLSRR01000443
Search identical group
Phylum/Class[LSRR] marine metagenome; iron chloride precipitation of viral particles from surface water samples
Species
Start position on genome 60861
End posion on genome 60786
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
agtatactat
tRNA gene sequence 
GCAGGTGTAGCTCAGTTGGTAGAGCAACAGATTCCAAATCCGTAGGTCCAGGGTTCGAAT
CCTTGCGCCTGTGCCA
Downstream region at tRNA end position 
atttcaaaga
Secondary structure (Cloverleaf model)
>WENV170727239	Trp	CCA
                   t      GCCA atttcaaaga
                     G + T
                     C - G
                     A - T
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     G T T C C     A
      T G A        A      | | + | |     G
    T       C T C G       C A G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    A - T
                    C - G
                    A   C
                    G - C
                    A - T
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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