The detailed information of tRNA gene sequence


Sequence ID>WENV170727240
Genome IDLSRR01000443
Search identical group
Phylum/Class[LSRR] marine metagenome; iron chloride precipitation of viral particles from surface water samples
Species
Start position on genome 59248
End posion on genome 59174
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ccaaacatgt
tRNA gene sequence 
GCGTGTGTAGCCGAATGGTTAGGCCCGAGATTGCAAATCTCGTTCATGCAGGTTCGAGTC
CTGTCACGCACTCCA
Downstream region at tRNA end position 
aataacgatg
Secondary structure (Cloverleaf model)
>WENV170727240	Cys	GCA
                   t      TCCA aataacgatg
                     G - C
                     C   A
                     G - C
                     T + G
                     G - C
                     T - A
                     G - C          T G
                    T     T G T C C     A
        A A        A      + | | | |     G
      T     G C C G       G C A G G     C
      G       | | |                 T T
      G     A G G C
        T T        C     TTCAT
                    C - G
                    G - C
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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