The detailed information of tRNA gene sequence


Sequence ID>PHG0100277
Genome IDAY375531
Search identical group
Phylum/ClassMyoviridae
SpeciesAeromonas virus 44RR2 T2L (AY375531)
Start position on genome 70315
End posion on genome 70222
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aaagaattca
tRNA gene sequence 
GGAAGCTTGGCAGAGTCTGGCTTATTGCACTAGTCTTGAAAACTAGCGATCGTAGGAATA
CGGTCCATCCGTTCAAATCGGATAGCTTCCGCCA
Downstream region at tRNA end position 
aacaccatcc
Secondary structure (Cloverleaf model)
>PHG0100277	Ser	TGA
                   a      GCCA aacaccatcc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     T - A          T A
                    T     T A G G C     A
    C T G A        G      | | | | |     A
  T         G A C G       A T C C G     C
  G         + | | |                 T T
  G         T T G C
    C T T A        A     CGATCGTAGGAATACGGTCC
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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