The detailed information of tRNA gene sequence


Sequence ID>PHG0100320
Genome IDAY682195
Search identical group
Phylum/ClassMyoviridae
SpeciesLactobacillus virus LP65 ATCC 11303-B5 (AY682195)
Start position on genome 53065
End posion on genome 52976
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcgctcattT
tRNA gene sequence 
GGAAAGTTGACAGAGTGGTTGATTGTGGCTCCCTGCTAAGGAGTTAATCGTGATAAGCGA
TTCAGGGGTTCGAATCCCTTACTTTCCATta
Downstream region at tRNA end position 
cttacagata
Secondary structure (Cloverleaf model)
>PHG0100320	Ser	GCT
                   T      ATta cttacagata
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     T - A          T A
                    T     T T C C C     A
      T G A        G      | + | | |     G
    G       G A C A       A G G G G     C
    G       + | | |                 T T
    T       T T G T
      T G A        G     TAATCGTGATAAGCGATTC
                    G + T
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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