The detailed information of tRNA gene sequence


Sequence ID>PHG0100338
Genome IDAY734508
Search identical group
Phylum/ClassSiphoviridae
SpeciesEscherichia virus T5 HER28 (AY734508)
Start position on genome 3578
End posion on genome 3490
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttataaattc
tRNA gene sequence 
GGAAGAATAGCATAACGGTATTGCAGCAGATTGCTAATCTGTCGGTTTGAAATATAGCCT
TGTGGGTTCGATTCCCACTTCTTCCGCCA
Downstream region at tRNA end position 
aattctggtt
Secondary structure (Cloverleaf model)
>PHG0100338	Ser	GCT
                   c      GCCA aattctggtt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     A - T          T T
                    T     C A C C C     A
        A A        A      | | | | |     G
      C     T A C G       G T G G G     C
      G       | | |                 T T
      G     T T G C
        T A        A     CGGTTTGAAATATAGCCTT
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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