The detailed information of tRNA gene sequence


Sequence ID>PHG0100425
Genome IDDQ398043
Search identical group
Phylum/ClassSiphoviridae
SpeciesMycobacterium virus Che12 Brazil-1 (DQ398043)
Start position on genome 4242
End posion on genome 4315
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tgggtctttc
tRNA gene sequence 
GGGTCAGTAGCTCAATCGGTAGAGCAGCGGTCTCCAAAGCCGCGCGTTGGAGGTTCGAGT
CCTCCCTGGCCCGCaa
Downstream region at tRNA end position 
cttgacatcc
Secondary structure (Cloverleaf model)
>PHG0100425	Trp	CCA
                   c      GCaa cttgacatcc
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     A - T
                     G - C          T G
                    T     C C T C C     A
      T A A        A      | | | | |     G
    C       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GCGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T + G
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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