The detailed information of tRNA gene sequence


Sequence ID>WENV170748469
Genome IDLUMD01027428
Search identical group
Phylum/Class[LUMD] marine metagenome; Red Sea water column Station 34 - depth 258m
Species
Start position on genome 623
End posion on genome 547
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
nnnnntaatT
tRNA gene sequence 
GGATCGATCGTCTAGCCTGGTTTGGATGACGCACTCACACTGCGTAGGTCATGGGTTCGA
ATCCCATTCGATCCATtt
Downstream region at tRNA end position 
tttacttgtt
Secondary structure (Cloverleaf model)
>WENV170748469	Val	CAC
                   T      ATtt tttacttgtt
                     G - C
                     G - C
                     A - T
                     T - A
                     C - G
                     G - C
                     A - T          T A
                    T     T A C C C     A
    C C G A        C      | | | | |     G
  T         T C T G       A T G G G     C
  G         + | | +                 T T
  G         G G A T
    T T T          G     AGGTC
                    A - T
                    C - G
                    G - C
                    C - G
                    A - T
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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