The detailed information of tRNA gene sequence


Sequence ID>WENV170752829
Genome IDLUMJ01005238
Search identical group
Phylum/Class[LUMJ] marine metagenome; Red Sea water column Station 22 - depth 500m
Species
Start position on genome 2488
End posion on genome 2404
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcaaccgtag
tRNA gene sequence 
GCGGGGATCGCCTAGCTTGGTAGGGCGTAGGATTGCTAATCCTATGTTCGTAAGAACTCG
TGGGTTCAAATCCCTCTCCCCGCGCtt
Downstream region at tRNA end position 
ttttaagtaa
Secondary structure (Cloverleaf model)
>WENV170752829	Ser	GCT
                   g      GCtt ttttaagtaa
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        C      |   | | |     A
    T       T C C G       G T G G G     C
    T       + | | |                 T T
    G       G G G C
      G T A        G     TGTTCGTAAGAACTC
                    T - A
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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