The detailed information of tRNA gene sequence


Sequence ID>WENV170756823
Genome IDLUMP01001823
Search identical group
Phylum/Class[LUMP] marine metagenome; Red Sea water column Station 12 - depth 47m
Species
Start position on genome 655
End posion on genome 572
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tacattaatT
tRNA gene sequence 
GCCGGGGTAGCCAAGTGGTAAGGCGGCTGTCTCGAAAACAGCTACGTGAAAGCGTGCAGG
GGTTCGAATCCCTTTCCCGGCGTtt
Downstream region at tRNA end position 
aaagatgttt
Secondary structure (Cloverleaf model)
>WENV170756823	Ser	CGA
                   T      GTtt aaagatgttt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     T T C C C     A
        G A        A      | + | | |     G
      T     A C C G       A G G G G     C
      G       | | |                 T T
      G     A G G C
        T A        G     TACGTGAAAGCGTGC
                    G - C
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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