The detailed information of tRNA gene sequence


Sequence ID>WENV170759033
Genome IDLUMS01001292
Search identical group
Phylum/Class[LUMS] marine metagenome; Red Sea water column Station 192 - depth 25m
Species
Start position on genome 4580
End posion on genome 4665
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gctcgtccgc
tRNA gene sequence 
GGAGGATTCGCATAGTGGCCTAGTGCGCTCGCTTGGAAAGCGGGTTGAGTGAAAGCTCTC
AGGGGTTCGAATCCCCTATCCTCCGCgt
Downstream region at tRNA end position 
cgaacgaagc
Secondary structure (Cloverleaf model)
>WENV170759033	Ser	GGA
                   c      GCgt cgaacgaagc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     T C C C C     A
      T G A        C      | | | | |     G
    G       T A C G       A G G G G     C
    G       + | | |                 T T
    C       G T G C
      C T A        G     TTGAGTGAAAGCTCTC
                    C - G
                    T + G
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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