The detailed information of tRNA gene sequence


Sequence ID>WENV170762822
Genome IDLWDU01000017
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 35095
End posion on genome 35181
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
agagaaataa
tRNA gene sequence 
GCCGGAGTGGTGAAATTGGTATACACGAGGGATTCAAAATCCCTTGCACGAAAGTGCGTG
CCGGTTCGAGTCCGGCCTCCGGTACCA
Downstream region at tRNA end position 
aatcagcaat
Secondary structure (Cloverleaf model)
>WENV170762822	Leu	CAA
                   a      ACCA aatcagcaat
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C G G C C     A
      T A A        G      | | | | |     G
    T       A G T G       G C C G G     C
    G         | | |                 T T
    G       A C A C
      T A T        G     TGCACGAAAGTGCGT
                    A - T
                    G - C
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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