The detailed information of tRNA gene sequence


Sequence ID>WENV170762833
Genome IDLWDU01000055
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 7994
End posion on genome 8068
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aataaaatag
tRNA gene sequence 
GGTCTGGTAGTGTAATGGTTACCACGCTAGCTTGTCACGCTAGAAATTGGAGTTCAATTC
TCCATCAGACCGCCA
Downstream region at tRNA end position 
ataggagaat
Secondary structure (Cloverleaf model)
>WENV170762833	Asp	GTC
                   g      GCCA ataggagaat
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C
                     G + T          T T
                    T     A C C T C     A
      T A A        A      | | | | |     A
    G       T G T G       T G G A G     C
    G         | | |                 T T
    T       C C A C
      T A          G     AAAT
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  T       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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