The detailed information of tRNA gene sequence


Sequence ID>WENV170762836
Genome IDLWDU01000056
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 34160
End posion on genome 34071
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gccaaattat
tRNA gene sequence 
GGAAAGGTGTCTGAGAGGTTTAAAGAACTGGTCTTGAAAACCAGCGAAGGTTTATCCCTT
CCGTGGGTTCGAATCCCACCTTTTCCGCCA
Downstream region at tRNA end position 
agttccggag
Secondary structure (Cloverleaf model)
>WENV170762836	Ser	TGA
                   t      GCCA agttccggag
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G + T
                     G - C          T A
                    T     C A C C C     A
      A G A        G      | | | | |     G
    G       G T C T       G T G G G     C
    G         | | |                 T T
    T       A A G A
      T T A        A     CGAAGGTTTATCCCTTCC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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