The detailed information of tRNA gene sequence


Sequence ID>WENV170762838
Genome IDLWDU01000059
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 29641
End posion on genome 29730
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
agaacttttt
tRNA gene sequence 
GGAGAGGTGGCAGAGGCCGGTCGAATGTACCGCACTCGAAATGCGGCGTACCGCAAGGTA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
tttgtctaag
Secondary structure (Cloverleaf model)
>WENV170762838	Ser	CGA
                   t      GCCA tttgtctaag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C G G A        G      | | | | |     G
  C         G A C G       G T G G G     C
  G           | | +                 T T
  G         A T G T
    T C G A        A     CGTACCGCAAGGTACC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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