The detailed information of tRNA gene sequence


Sequence ID>WENV170762839
Genome IDLWDU01000059
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 35072
End posion on genome 35162
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tcccggagaa
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGTTGAAGGCGCACGCCTGGAAAGTGTGTATACGTTAATAGCGT
ATCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gatgttttct
Secondary structure (Cloverleaf model)
>WENV170762839	Ser	GGA
                   a      GCCA gatgttttct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATACGTTAATAGCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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