The detailed information of tRNA gene sequence


Sequence ID>WENV170762843
Genome IDLWDU01000065
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 52152
End posion on genome 52077
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
agtaattagt
tRNA gene sequence 
AGGCCAGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGCTGTTGGGGGTTCGAGT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
ctttaaagtt
Secondary structure (Cloverleaf model)
>WENV170762843	Trp	CCA
                   t      GCCA ctttaaagtt
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T T G       G G G G G     C
    G       | | + |                 T T
    G       G A G C
      T A          A     CTGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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