The detailed information of tRNA gene sequence


Sequence ID>WENV170762864
Genome IDLWDU01000109
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 1073
End posion on genome 1160
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tacttacagc
tRNA gene sequence 
GGAGAGTTGTCCGAGTGGCTTATGGTGCAACCTTGGAAAGGTTGTGTAGGGAAACCTACC
GGGAGTTCGAATCTCCCACTCTCCGCCA
Downstream region at tRNA end position 
aagtacttgt
Secondary structure (Cloverleaf model)
>WENV170762864	Ser	GGA
                   c      GCCA aagtacttgt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C C C T C     A
      T G A        G      | | | | |     G
    G       G C C T       G G G A G     C
    G       + | |                   T T
    C       T G G T
      T T A        G     TGTAGGGAAACCTACC
                    C - G
                    A - T
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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