The detailed information of tRNA gene sequence


Sequence ID>WENV170762875
Genome IDLWDU01000124
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 13291
End posion on genome 13366
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
ccctcctcct
tRNA gene sequence 
GGGGCCGTAGCTCAGCTGGGAGAGCGTCGCGTTCGCAATGCGAAGGTCAGGAGTTCGATC
CTCCTCGGCTCCACCA
Downstream region at tRNA end position 
atttttccct
Secondary structure (Cloverleaf model)
>WENV170762875	Ala	CGC
                   t      ACCA atttttccct
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          C T
                    T     T C C T C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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