The detailed information of tRNA gene sequence


Sequence ID>WENV170762888
Genome IDLWDU01000202
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 9748
End posion on genome 9659
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gccaattaaa
tRNA gene sequence 
GGAAAGGTGTCTGAGAGGTCTAAAGAACTGGTCTTGAAAACCAGCGAGGGTTTATCCCCT
CCGTGGGTTCGAATCCCACCTTTTCCGCCA
Downstream region at tRNA end position 
taataatgcc
Secondary structure (Cloverleaf model)
>WENV170762888	Ser	TGA
                   a      GCCA taataatgcc
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G + T
                     G - C          T A
                    T     C A C C C     A
      A G A        G      | | | | |     G
    G       G T C T       G T G G G     C
    G         | | |                 T T
    T       A A G A
      C T A        A     CGAGGGTTTATCCCCTCC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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