The detailed information of tRNA gene sequence


Sequence ID>WENV170762903
Genome IDLWDU01000240
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 23406
End posion on genome 23481
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tttttgttaa
tRNA gene sequence 
ACGGGTGTAGCTCAATTGGTAGAGTAGCGGTCTCCAAAACCGTTGGTTGGGAGTTCGAGT
CTCTCCTCCCGTGCTA
Downstream region at tRNA end position 
ggagccttaa
Secondary structure (Cloverleaf model)
>WENV170762903	Trp	CCA
                   a      GCTA ggagccttaa
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     T   T
                     G - C          T G
                    T     C T C T C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G A G     C
    G       | | | +                 T T
    G       G A G T
      T A          A     TGGTT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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