The detailed information of tRNA gene sequence


Sequence ID>WENV170762920
Genome IDLWDU01000308
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 656
End posion on genome 564
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctggaacacc
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGCTGAAGGCGCTCCCCTGCTAAGGGAGTATGGGGTTTATAGCT
CCATCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
tccattaatc
Secondary structure (Cloverleaf model)
>WENV170762920	Ser	GCT
                   c      GCCA tccattaatc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATGGGGTTTATAGCTCCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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