The detailed information of tRNA gene sequence


Sequence ID>WENV170762933
Genome IDLWDU01000433
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 5989
End posion on genome 6064
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttacgttttt
tRNA gene sequence 
GCACCTGTAGCTCAGTTGGTAGAGCAAGCGGCTCATAACCGCCAGGTCCCAGGTTCAAAT
CCTGGCAGGTGTACCA
Downstream region at tRNA end position 
taagaaaaag
Secondary structure (Cloverleaf model)
>WENV170762933	Met	CAT
                   t      ACCA taagaaaaag
                     G + T
                     C - G
                     A - T
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     G G T C C     A
      T G A        A      | | | | |     A
    T       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    A   C
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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