The detailed information of tRNA gene sequence


Sequence ID>WENV170762975
Genome IDLWDU01000724
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 8774
End posion on genome 8698
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gttttccacT
tRNA gene sequence 
GGGGGCATAGCATAATCTGGTTAGTGTGGCCGGTTCCAGACCGGCTGATCGGGGTTCAAA
TCCCTGTGTCCCCATCt
Downstream region at tRNA end position 
ctgttttaga
Secondary structure (Cloverleaf model)
>WENV170762975	Trp	CCA
                   T      ATCt ctgttttaga
                     G - C
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     A - T          T A
                    T     G T C C C     A
    C T A A        A      | + | | |     A
  T         T A C G       C G G G G     C
  G         + | | +                 T T
  G         G T G T
    T T A          G     TGAT
                    G - C
                    C - G
                    C - G
                    G - C
                    G - C
                  T       A
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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